Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox18P43680 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Sox18P43680 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Gm25318-201ENSMUST00000122554 314 ntBASIC12.9□□□□□ -0.34
Sox18P43680 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC12.9□□□□□ -0.34
Sox18P43680 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
Sox18P43680 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC12.9□□□□□ -0.34
Sox18P43680 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox18P43680 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Gm8679-201ENSMUST00000210651 1036 ntBASIC12.9□□□□□ -0.34
Sox18P43680 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sox18P43680 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Mir497b-201ENSMUST00000093601 125 ntBASIC12.9□□□□□ -0.34
Sox18P43680 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Sox18P43680 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sox18P43680 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.9□□□□□ -0.34
Sox18P43680 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Sox18P43680 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Sox18P43680 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Sox18P43680 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sox18P43680 Gm6015-201ENSMUST00000217493 1586 ntBASIC12.9□□□□□ -0.35
Sox18P43680 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.89□□□□□ -0.35
Sox18P43680 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sox18P43680 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox18P43680 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sox18P43680 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC12.89□□□□□ -0.35
Sox18P43680 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sox18P43680 Gm2606-201ENSMUST00000100754 1002 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm12537-201ENSMUST00000119266 1002 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm12070-201ENSMUST00000119551 1002 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm12671-201ENSMUST00000119978 1002 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm13292-201ENSMUST00000120014 1000 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC12.89□□□□□ -0.35
Sox18P43680 B9d1os-201ENSMUST00000137010 674 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm24990-201ENSMUST00000157406 323 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sox18P43680 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.89□□□□□ -0.35
Sox18P43680 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC12.89□□□□□ -0.35
Sox18P43680 Gm10359-201ENSMUST00000180167 1002 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm12033-201ENSMUST00000180654 1002 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm5559-201ENSMUST00000180755 1002 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm42997-202ENSMUST00000200321 985 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.89□□□□□ -0.35
Sox18P43680 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Gm7293-201ENSMUST00000216682 1007 ntBASIC12.89□□□□□ -0.35
Sox18P43680 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 1700011I03Rik-201ENSMUST00000079738 1013 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Sox18P43680 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sox18P43680 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sox18P43680 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Sox18P43680 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sox18P43680 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms