Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC13.72□□□□□ -0.21
Cxcl12P40224 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cxcl12P40224 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Cxcl12P40224 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.72□□□□□ -0.21
Cxcl12P40224 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.72□□□□□ -0.21
Cxcl12P40224 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cxcl12P40224 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
Cxcl12P40224 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
Cxcl12P40224 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 Gm25214-201ENSMUST00000104573 129 ntBASIC13.71□□□□□ -0.21
Cxcl12P40224 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC13.71□□□□□ -0.21
Cxcl12P40224 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.71□□□□□ -0.21
Cxcl12P40224 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 Gm9004-201ENSMUST00000218739 1222 ntBASIC13.71□□□□□ -0.21
Cxcl12P40224 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cxcl12P40224 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.71□□□□□ -0.22
Cxcl12P40224 4933421I07Rik-201ENSMUST00000032648 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Cxcl12P40224 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cxcl12P40224 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cxcl12P40224 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Cxcl12P40224 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Cxcl12P40224 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.7□□□□□ -0.22
Cxcl12P40224 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cxcl12P40224 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cxcl12P40224 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.7□□□□□ -0.22
Cxcl12P40224 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cxcl12P40224 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
Cxcl12P40224 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Gm4760-201ENSMUST00000119663 1030 ntBASIC13.7□□□□□ -0.22
Cxcl12P40224 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC13.7□□□□□ -0.22
Cxcl12P40224 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC13.7□□□□□ -0.22
Cxcl12P40224 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Cxcl12P40224 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Gm7467-201ENSMUST00000185173 652 ntBASIC13.7□□□□□ -0.22
Cxcl12P40224 Gm44405-201ENSMUST00000198952 126 ntBASIC13.7□□□□□ -0.22
Cxcl12P40224 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.7□□□□□ -0.22
Cxcl12P40224 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Cxcl12P40224 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
Cxcl12P40224 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC13.7□□□□□ -0.22
Cxcl12P40224 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Cxcl12P40224 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Cxcl12P40224 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC13.69□□□□□ -0.22
Cxcl12P40224 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Cxcl12P40224 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Gm13611-201ENSMUST00000118269 318 ntBASIC13.69□□□□□ -0.22
Cxcl12P40224 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC13.69□□□□□ -0.22
Cxcl12P40224 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC13.69□□□□□ -0.22
Cxcl12P40224 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC13.69□□□□□ -0.22
Cxcl12P40224 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC13.69□□□□□ -0.22
Cxcl12P40224 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.69□□□□□ -0.22
Cxcl12P40224 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC13.69□□□□□ -0.22
Cxcl12P40224 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC13.69□□□□□ -0.22
Cxcl12P40224 Gm32025-201ENSMUST00000217960 307 ntBASIC13.69□□□□□ -0.22
Cxcl12P40224 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 CT025694.1-201ENSMUST00000226188 934 ntBASIC13.69□□□□□ -0.22
Cxcl12P40224 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cxcl12P40224 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms