Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Mir7221-201ENSMUST00000184009 72 ntBASIC11.76□□□□□ -0.53
Upk2P38575 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.76□□□□□ -0.53
Upk2P38575 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.76□□□□□ -0.53
Upk2P38575 Gm28631-201ENSMUST00000190740 334 ntBASIC11.76□□□□□ -0.53
Upk2P38575 Gm42550-201ENSMUST00000201553 960 ntBASIC11.76□□□□□ -0.53
Upk2P38575 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC11.76□□□□□ -0.53
Upk2P38575 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.76□□□□□ -0.53
Upk2P38575 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.76□□□□□ -0.53
Upk2P38575 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.76□□□□□ -0.53
Upk2P38575 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Upk2P38575 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Upk2P38575 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Upk2P38575 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Upk2P38575 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
Upk2P38575 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk2P38575 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Upk2P38575 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.75□□□□□ -0.53
Upk2P38575 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk2P38575 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.75□□□□□ -0.53
Upk2P38575 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.75□□□□□ -0.53
Upk2P38575 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.75□□□□□ -0.53
Upk2P38575 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.75□□□□□ -0.53
Upk2P38575 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.75□□□□□ -0.53
Upk2P38575 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.75□□□□□ -0.53
Upk2P38575 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Syt7-205ENSMUST00000224135 1557 ntBASIC11.75□□□□□ -0.53
Upk2P38575 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
Upk2P38575 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Upk2P38575 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Upk2P38575 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC11.74□□□□□ -0.53
Upk2P38575 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Upk2P38575 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC11.74□□□□□ -0.53
Upk2P38575 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC11.74□□□□□ -0.53
Upk2P38575 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
Upk2P38575 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Upk2P38575 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Upk2P38575 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk2P38575 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Gm29608-201ENSMUST00000190444 463 ntBASIC11.74□□□□□ -0.53
Upk2P38575 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC11.74□□□□□ -0.53
Upk2P38575 Gm38223-201ENSMUST00000194484 695 ntBASIC11.74□□□□□ -0.53
Upk2P38575 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Upk2P38575 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms