Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Foxa1P35582 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Foxa1P35582 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Foxa1P35582 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Foxa1P35582 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Foxa1P35582 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Foxa1P35582 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.4□□□□□ -0.43
Foxa1P35582 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Foxa1P35582 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Foxa1P35582 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.4□□□□□ -0.43
Foxa1P35582 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Foxa1P35582 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Foxa1P35582 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.39□□□□□ -0.43
Foxa1P35582 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Gm45546-201ENSMUST00000211053 2394 ntBASIC12.39□□□□□ -0.43
Foxa1P35582 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.39□□□□□ -0.43
Foxa1P35582 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.39□□□□□ -0.43
Foxa1P35582 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.39□□□□□ -0.43
Foxa1P35582 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC12.39□□□□□ -0.43
Foxa1P35582 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.39□□□□□ -0.43
Foxa1P35582 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Foxa1P35582 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.39□□□□□ -0.43
Foxa1P35582 Gm45384-201ENSMUST00000210451 277 ntBASIC12.39□□□□□ -0.43
Foxa1P35582 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.39□□□□□ -0.43
Foxa1P35582 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
Foxa1P35582 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Foxa1P35582 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Foxa1P35582 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Foxa1P35582 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Foxa1P35582 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
Foxa1P35582 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Foxa1P35582 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Foxa1P35582 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Foxa1P35582 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.38□□□□□ -0.43
Foxa1P35582 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Foxa1P35582 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Foxa1P35582 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC12.38□□□□□ -0.43
Foxa1P35582 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Foxa1P35582 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.38□□□□□ -0.43
Foxa1P35582 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
Foxa1P35582 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Gm27701-201ENSMUST00000184498 110 ntBASIC12.38□□□□□ -0.43
Foxa1P35582 Gm28911-201ENSMUST00000188837 117 ntBASIC12.38□□□□□ -0.43
Foxa1P35582 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.38□□□□□ -0.43
Foxa1P35582 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Foxa1P35582 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.38□□□□□ -0.43
Foxa1P35582 Gm26315-201ENSMUST00000083890 321 ntBASIC12.38□□□□□ -0.43
Foxa1P35582 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.38□□□□□ -0.43
Foxa1P35582 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Foxa1P35582 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Foxa1P35582 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms