Protein–RNA interactions for Protein: P16388

Kcna1, Potassium voltage-gated channel subfamily A member 1, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kcna1P16388 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.2■□□□□ 0.02
Kcna1P16388 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.2■□□□□ 0.02
Kcna1P16388 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Kcna1P16388 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Kcna1P16388 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Kcna1P16388 Gm27847-201ENSMUST00000183711 107 ntBASIC15.2■□□□□ 0.02
Kcna1P16388 Gm27375-201ENSMUST00000183799 107 ntBASIC15.2■□□□□ 0.02
Kcna1P16388 Gm43433-201ENSMUST00000196573 481 ntBASIC15.2■□□□□ 0.02
Kcna1P16388 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Kcna1P16388 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.2■□□□□ 0.02
Kcna1P16388 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Kcna1P16388 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Kcna1P16388 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Kcna1P16388 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Kcna1P16388 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.2■□□□□ 0.02
Kcna1P16388 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Kcna1P16388 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.2■□□□□ 0.02
Kcna1P16388 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Kcna1P16388 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Kcna1P16388 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.2■□□□□ 0.02
Kcna1P16388 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Kcna1P16388 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.2■□□□□ 0.02
Kcna1P16388 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Kcna1P16388 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Kcna1P16388 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Kcna1P16388 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC15.19■□□□□ 0.02
Kcna1P16388 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.19■□□□□ 0.02
Kcna1P16388 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.19■□□□□ 0.02
Kcna1P16388 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.19■□□□□ 0.02
Kcna1P16388 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Kcna1P16388 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC15.19■□□□□ 0.02
Kcna1P16388 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.19■□□□□ 0.02
Kcna1P16388 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.19■□□□□ 0.02
Kcna1P16388 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
Kcna1P16388 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Kcna1P16388 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.18■□□□□ 0.02
Kcna1P16388 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC15.18■□□□□ 0.02
Kcna1P16388 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.18■□□□□ 0.02
Kcna1P16388 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC15.18■□□□□ 0.02
Kcna1P16388 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.18■□□□□ 0.02
Kcna1P16388 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.18■□□□□ 0.02
Kcna1P16388 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Kcna1P16388 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Kcna1P16388 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Kcna1P16388 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.18■□□□□ 0.02
Kcna1P16388 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC15.18■□□□□ 0.02
Kcna1P16388 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Kcna1P16388 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.18■□□□□ 0.02
Kcna1P16388 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.18■□□□□ 0.02
Kcna1P16388 Grk6-205ENSMUST00000224653 2976 ntBASIC15.18■□□□□ 0.02
Kcna1P16388 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.18■□□□□ 0.02
Kcna1P16388 AC134335.2-201ENSMUST00000227660 440 ntBASIC15.18■□□□□ 0.02
Kcna1P16388 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Gm25857-201ENSMUST00000082788 129 ntBASIC15.18■□□□□ 0.02
Kcna1P16388 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Kcna1P16388 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.18■□□□□ 0.02
Kcna1P16388 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC15.18■□□□□ 0.02
Kcna1P16388 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Kcna1P16388 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Kcna1P16388 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 63.3 ms