Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Gm37922-201ENSMUST00000195596 455 ntBASIC19.86■□□□□ 0.77
NclP09405 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC19.86■□□□□ 0.77
NclP09405 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NclP09405 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
NclP09405 Abhd6-203ENSMUST00000225234 1958 ntBASIC19.86■□□□□ 0.77
NclP09405 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
NclP09405 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC19.85■□□□□ 0.77
NclP09405 Gm38197-201ENSMUST00000192320 2122 ntBASIC19.85■□□□□ 0.77
NclP09405 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Gm10339-203ENSMUST00000225409 1671 ntBASIC19.85■□□□□ 0.77
NclP09405 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Gm5187-201ENSMUST00000117317 991 ntBASIC19.85■□□□□ 0.77
NclP09405 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Gm27514-201ENSMUST00000183692 110 ntBASIC19.85■□□□□ 0.77
NclP09405 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC19.85■□□□□ 0.77
NclP09405 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC19.85■□□□□ 0.77
NclP09405 Gm37497-201ENSMUST00000195830 798 ntBASIC19.85■□□□□ 0.77
NclP09405 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
NclP09405 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC19.85■□□□□ 0.77
NclP09405 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
NclP09405 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
NclP09405 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
NclP09405 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
NclP09405 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NclP09405 Gm19863-201ENSMUST00000192480 2218 ntBASIC19.84■□□□□ 0.77
NclP09405 Gm12846-201ENSMUST00000120431 1373 ntBASIC19.84■□□□□ 0.77
NclP09405 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NclP09405 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NclP09405 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NclP09405 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
NclP09405 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NclP09405 Gm23931-201ENSMUST00000103842 109 ntBASIC19.84■□□□□ 0.77
NclP09405 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC19.84■□□□□ 0.77
NclP09405 Gm14350-201ENSMUST00000116642 640 ntBASIC19.84■□□□□ 0.77
NclP09405 Gm11618-201ENSMUST00000117946 267 ntBASIC19.84■□□□□ 0.77
NclP09405 Gm13369-201ENSMUST00000119442 987 ntBASIC19.84■□□□□ 0.77
NclP09405 Gm1335-201ENSMUST00000121653 386 ntBASIC19.84■□□□□ 0.77
NclP09405 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC19.84■□□□□ 0.77
NclP09405 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
NclP09405 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC19.84■□□□□ 0.77
NclP09405 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NclP09405 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
NclP09405 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NclP09405 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
NclP09405 AC166491.1-201ENSMUST00000227053 2308 ntBASIC19.84■□□□□ 0.77
NclP09405 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
NclP09405 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
NclP09405 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NclP09405 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC19.83■□□□□ 0.77
NclP09405 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NclP09405 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NclP09405 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC19.83■□□□□ 0.77
NclP09405 Gm5639-201ENSMUST00000122305 2403 ntBASIC19.83■□□□□ 0.77
NclP09405 Gm43399-201ENSMUST00000202546 2374 ntBASIC19.83■□□□□ 0.77
NclP09405 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NclP09405 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC19.83■□□□□ 0.77
NclP09405 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NclP09405 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC19.83■□□□□ 0.77
NclP09405 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NclP09405 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NclP09405 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NclP09405 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
NclP09405 Gm27682-201ENSMUST00000183930 110 ntBASIC19.83■□□□□ 0.77
NclP09405 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NclP09405 Gm44064-201ENSMUST00000204964 1087 ntBASIC19.83■□□□□ 0.77
NclP09405 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
NclP09405 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
NclP09405 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
NclP09405 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NclP09405 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
NclP09405 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
NclP09405 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
NclP09405 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC19.83■□□□□ 0.76
NclP09405 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
NclP09405 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
NclP09405 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms