Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc8P09025 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxc8P09025 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC14.15□□□□□ -0.15
Hoxc8P09025 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.15□□□□□ -0.15
Hoxc8P09025 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.15□□□□□ -0.15
Hoxc8P09025 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxc8P09025 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
Hoxc8P09025 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Gm11531-201ENSMUST00000117614 555 ntBASIC14.14□□□□□ -0.15
Hoxc8P09025 Gm12997-201ENSMUST00000120207 640 ntBASIC14.14□□□□□ -0.15
Hoxc8P09025 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.14□□□□□ -0.15
Hoxc8P09025 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Mir7070-201ENSMUST00000183657 86 ntBASIC14.14□□□□□ -0.15
Hoxc8P09025 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.14□□□□□ -0.15
Hoxc8P09025 Gm43416-201ENSMUST00000201916 1015 ntBASIC14.14□□□□□ -0.15
Hoxc8P09025 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.14□□□□□ -0.15
Hoxc8P09025 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Hoxc8P09025 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Mir433-201ENSMUST00000093564 124 ntBASIC14.14□□□□□ -0.15
Hoxc8P09025 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC14.14□□□□□ -0.15
Hoxc8P09025 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Hoxc8P09025 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Hoxc8P09025 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.13□□□□□ -0.15
Hoxc8P09025 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Hoxc8P09025 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Gm24830-201ENSMUST00000102024 166 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hoxc8P09025 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Gm25890-201ENSMUST00000177643 165 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Gm22614-201ENSMUST00000178300 165 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC14.13□□□□□ -0.15
Hoxc8P09025 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.13□□□□□ -0.15
Hoxc8P09025 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hoxc8P09025 Gm22042-201ENSMUST00000082989 165 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Gm26232-201ENSMUST00000083360 166 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Gm24136-201ENSMUST00000083374 165 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Gm26110-201ENSMUST00000083971 165 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.13□□□□□ -0.15
Hoxc8P09025 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hoxc8P09025 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.13□□□□□ -0.15
Hoxc8P09025 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc8P09025 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
Hoxc8P09025 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc8P09025 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hoxc8P09025 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc8P09025 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hoxc8P09025 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC14.12□□□□□ -0.15
Hoxc8P09025 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxc8P09025 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC14.12□□□□□ -0.15
Hoxc8P09025 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.12□□□□□ -0.15
Hoxc8P09025 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxc8P09025 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxc8P09025 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc8P09025 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc8P09025 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms