Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
ClppO88696 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.16□□□□□ -0.3
ClppO88696 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ClppO88696 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
ClppO88696 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.15□□□□□ -0.3
ClppO88696 Mir1894-201ENSMUST00000122802 81 ntBASIC13.15□□□□□ -0.3
ClppO88696 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.15□□□□□ -0.3
ClppO88696 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.15□□□□□ -0.3
ClppO88696 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.15□□□□□ -0.3
ClppO88696 Gm6266-201ENSMUST00000203844 806 ntBASIC13.15□□□□□ -0.3
ClppO88696 Gm44719-201ENSMUST00000206404 149 ntBASIC13.15□□□□□ -0.3
ClppO88696 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
ClppO88696 Gm5035-201ENSMUST00000215581 927 ntBASIC13.15□□□□□ -0.3
ClppO88696 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC13.15□□□□□ -0.3
ClppO88696 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
ClppO88696 Gm5356-201ENSMUST00000093326 615 ntBASIC13.15□□□□□ -0.3
ClppO88696 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
ClppO88696 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.15□□□□□ -0.3
ClppO88696 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
ClppO88696 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.15□□□□□ -0.3
ClppO88696 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.15□□□□□ -0.3
ClppO88696 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
ClppO88696 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
ClppO88696 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.15□□□□□ -0.31
ClppO88696 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
ClppO88696 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
ClppO88696 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
ClppO88696 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.14□□□□□ -0.31
ClppO88696 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
ClppO88696 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Gm15678-201ENSMUST00000117573 960 ntBASIC13.14□□□□□ -0.31
ClppO88696 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.14□□□□□ -0.31
ClppO88696 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC13.14□□□□□ -0.31
ClppO88696 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.14□□□□□ -0.31
ClppO88696 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.14□□□□□ -0.31
ClppO88696 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.14□□□□□ -0.31
ClppO88696 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.14□□□□□ -0.31
ClppO88696 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
ClppO88696 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ClppO88696 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
ClppO88696 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
ClppO88696 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.14□□□□□ -0.31
ClppO88696 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.14□□□□□ -0.31
ClppO88696 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
ClppO88696 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.14□□□□□ -0.31
ClppO88696 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC13.13□□□□□ -0.31
ClppO88696 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
ClppO88696 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
ClppO88696 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC13.13□□□□□ -0.31
ClppO88696 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
ClppO88696 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms