Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.37□□□□□ -0.43
Cops4O88544 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cops4O88544 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.37□□□□□ -0.43
Cops4O88544 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.37□□□□□ -0.43
Cops4O88544 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12.37□□□□□ -0.43
Cops4O88544 Gm18049-201ENSMUST00000208909 581 ntBASIC12.37□□□□□ -0.43
Cops4O88544 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
Cops4O88544 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Cops4O88544 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.37□□□□□ -0.43
Cops4O88544 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.37□□□□□ -0.43
Cops4O88544 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Cops4O88544 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.37□□□□□ -0.43
Cops4O88544 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.37□□□□□ -0.43
Cops4O88544 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.37□□□□□ -0.43
Cops4O88544 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Cops4O88544 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cops4O88544 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.36□□□□□ -0.43
Cops4O88544 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Cops4O88544 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Gm13365-201ENSMUST00000121188 973 ntBASIC12.36□□□□□ -0.43
Cops4O88544 Gm11594-201ENSMUST00000122313 162 ntBASIC12.36□□□□□ -0.43
Cops4O88544 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.36□□□□□ -0.43
Cops4O88544 Gm9824-201ENSMUST00000178707 561 ntBASIC12.36□□□□□ -0.43
Cops4O88544 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.36□□□□□ -0.43
Cops4O88544 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.36□□□□□ -0.43
Cops4O88544 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Zfp536-201ENSMUST00000056338 4621 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Cops4O88544 BC001981-202ENSMUST00000191393 1545 ntBASIC12.36□□□□□ -0.43
Cops4O88544 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC12.36□□□□□ -0.43
Cops4O88544 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Nudt18-202ENSMUST00000228554 3619 ntBASIC12.36□□□□□ -0.43
Cops4O88544 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Cops4O88544 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Cops4O88544 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.35□□□□□ -0.43
Cops4O88544 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 Gm4995-201ENSMUST00000117247 432 ntBASIC12.35□□□□□ -0.43
Cops4O88544 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.35□□□□□ -0.43
Cops4O88544 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.35□□□□□ -0.43
Cops4O88544 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.35□□□□□ -0.43
Cops4O88544 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.35□□□□□ -0.43
Cops4O88544 AA619741-201ENSMUST00000195095 646 ntBASIC12.35□□□□□ -0.43
Cops4O88544 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Cops4O88544 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.35□□□□□ -0.43
Cops4O88544 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.35□□□□□ -0.43
Cops4O88544 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Cops4O88544 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms