Protein–RNA interactions for Protein: O70258

Sgce, Epsilon-sarcoglycan, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgceO70258 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC12.03□□□□□ -0.48
SgceO70258 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
SgceO70258 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.03□□□□□ -0.48
SgceO70258 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SgceO70258 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.03□□□□□ -0.48
SgceO70258 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SgceO70258 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SgceO70258 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SgceO70258 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.02□□□□□ -0.48
SgceO70258 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgceO70258 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgceO70258 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgceO70258 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
SgceO70258 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgceO70258 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgceO70258 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgceO70258 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgceO70258 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
SgceO70258 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.02□□□□□ -0.49
SgceO70258 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.02□□□□□ -0.49
SgceO70258 Gm15770-201ENSMUST00000117498 584 ntBASIC12.02□□□□□ -0.49
SgceO70258 Gm27772-201ENSMUST00000184900 187 ntBASIC12.02□□□□□ -0.49
SgceO70258 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC12.02□□□□□ -0.49
SgceO70258 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SgceO70258 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SgceO70258 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.02□□□□□ -0.49
SgceO70258 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SgceO70258 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.02□□□□□ -0.49
SgceO70258 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SgceO70258 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.01□□□□□ -0.49
SgceO70258 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC12.01□□□□□ -0.49
SgceO70258 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC12.01□□□□□ -0.49
SgceO70258 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC12.01□□□□□ -0.49
SgceO70258 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SgceO70258 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.01□□□□□ -0.49
SgceO70258 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC12.01□□□□□ -0.49
SgceO70258 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
SgceO70258 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.01□□□□□ -0.49
SgceO70258 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.01□□□□□ -0.49
SgceO70258 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.01□□□□□ -0.49
SgceO70258 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
SgceO70258 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.01□□□□□ -0.49
SgceO70258 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SgceO70258 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms