Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.61□□□□□ -0.71
Efnb3O35393 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC10.61□□□□□ -0.71
Efnb3O35393 Gm26308-201ENSMUST00000157768 69 ntBASIC10.61□□□□□ -0.71
Efnb3O35393 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC10.61□□□□□ -0.71
Efnb3O35393 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC10.61□□□□□ -0.71
Efnb3O35393 Mir6990-201ENSMUST00000183724 91 ntBASIC10.61□□□□□ -0.71
Efnb3O35393 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Efnb3O35393 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Efnb3O35393 Ighv1-25-201ENSMUST00000195638 345 ntBASIC10.61□□□□□ -0.71
Efnb3O35393 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC10.61□□□□□ -0.71
Efnb3O35393 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC10.61□□□□□ -0.71
Efnb3O35393 Gm4971-201ENSMUST00000205991 1108 ntBASIC10.61□□□□□ -0.71
Efnb3O35393 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.61□□□□□ -0.71
Efnb3O35393 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.61□□□□□ -0.71
Efnb3O35393 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC10.61□□□□□ -0.71
Efnb3O35393 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Efnb3O35393 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Efnb3O35393 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
Efnb3O35393 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.61□□□□□ -0.71
Efnb3O35393 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Efnb3O35393 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Efnb3O35393 Tmed9-203ENSMUST00000224741 1450 ntBASIC10.61□□□□□ -0.71
Efnb3O35393 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Efnb3O35393 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Efnb3O35393 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.6□□□□□ -0.71
Efnb3O35393 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Efnb3O35393 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Gm23935-201ENSMUST00000102303 57 ntBASIC10.6□□□□□ -0.71
Efnb3O35393 Gm24270-201ENSMUST00000102326 57 ntBASIC10.6□□□□□ -0.71
Efnb3O35393 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC10.6□□□□□ -0.71
Efnb3O35393 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Gm24245-201ENSMUST00000157318 57 ntBASIC10.6□□□□□ -0.71
Efnb3O35393 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC10.6□□□□□ -0.71
Efnb3O35393 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC10.6□□□□□ -0.71
Efnb3O35393 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.6□□□□□ -0.71
Efnb3O35393 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Gm8396-201ENSMUST00000057361 823 ntBASIC10.6□□□□□ -0.71
Efnb3O35393 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC10.6□□□□□ -0.71
Efnb3O35393 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC10.6□□□□□ -0.71
Efnb3O35393 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Efnb3O35393 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
Efnb3O35393 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 AC164702.1-201ENSMUST00000220135 2212 ntBASIC10.6□□□□□ -0.71
Efnb3O35393 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
Efnb3O35393 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.6□□□□□ -0.71
Efnb3O35393 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC10.59□□□□□ -0.71
Efnb3O35393 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.59□□□□□ -0.71
Efnb3O35393 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC10.59□□□□□ -0.71
Efnb3O35393 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Efnb3O35393 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC10.59□□□□□ -0.71
Efnb3O35393 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC10.59□□□□□ -0.71
Efnb3O35393 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.59□□□□□ -0.71
Efnb3O35393 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.59□□□□□ -0.71
Efnb3O35393 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Efnb3O35393 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC10.59□□□□□ -0.71
Efnb3O35393 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC10.59□□□□□ -0.71
Efnb3O35393 Gm15678-201ENSMUST00000117573 960 ntBASIC10.59□□□□□ -0.71
Efnb3O35393 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms