Protein–RNA interactions for Protein: O08602

Raet1a, Retinoic acid early-inducible protein 1-alpha, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raet1aO08602 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.9□□□□□ -0.5
Raet1aO08602 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
Raet1aO08602 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.9□□□□□ -0.5
Raet1aO08602 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
Raet1aO08602 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.9□□□□□ -0.5
Raet1aO08602 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.9□□□□□ -0.5
Raet1aO08602 AC158982.1-201ENSMUST00000228377 901 ntBASIC11.9□□□□□ -0.5
Raet1aO08602 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Raet1aO08602 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.9□□□□□ -0.5
Raet1aO08602 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Raet1aO08602 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.9□□□□□ -0.5
Raet1aO08602 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC11.9□□□□□ -0.5
Raet1aO08602 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Raet1aO08602 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Raet1aO08602 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Raet1aO08602 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Raet1aO08602 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Raet1aO08602 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.89□□□□□ -0.51
Raet1aO08602 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
Raet1aO08602 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Raet1aO08602 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.89□□□□□ -0.51
Raet1aO08602 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
Raet1aO08602 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Raet1aO08602 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.89□□□□□ -0.51
Raet1aO08602 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Gm15678-201ENSMUST00000117573 960 ntBASIC11.89□□□□□ -0.51
Raet1aO08602 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Raet1aO08602 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Raet1aO08602 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.89□□□□□ -0.51
Raet1aO08602 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.89□□□□□ -0.51
Raet1aO08602 Gm10576-201ENSMUST00000191927 825 ntBASIC11.89□□□□□ -0.51
Raet1aO08602 Gm18041-201ENSMUST00000218210 618 ntBASIC11.89□□□□□ -0.51
Raet1aO08602 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.89□□□□□ -0.51
Raet1aO08602 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC11.89□□□□□ -0.51
Raet1aO08602 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.89□□□□□ -0.51
Raet1aO08602 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.89□□□□□ -0.51
Raet1aO08602 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Raet1aO08602 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.89□□□□□ -0.51
Raet1aO08602 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Raet1aO08602 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Raet1aO08602 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Raet1aO08602 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1aO08602 Syt7-205ENSMUST00000224135 1557 ntBASIC11.88□□□□□ -0.51
Raet1aO08602 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1aO08602 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1aO08602 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1aO08602 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Raet1aO08602 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1aO08602 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.88□□□□□ -0.51
Raet1aO08602 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Raet1aO08602 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1aO08602 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1aO08602 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.88□□□□□ -0.51
Raet1aO08602 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1aO08602 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Raet1aO08602 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1aO08602 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Raet1aO08602 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC11.88□□□□□ -0.51
Raet1aO08602 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 11.9 ms