Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 AC151895.1-201ENSMUST00000219025 1742 ntBASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Gm42480-201ENSMUST00000198434 2595 ntBASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Gm15678-201ENSMUST00000117573 960 ntBASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.21□□□□□ -0.45
Shisa8J3QNX5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Shisa8J3QNX5 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.21□□□□□ -0.46
Shisa8J3QNX5 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa8J3QNX5 Vps36-201ENSMUST00000033866 3574 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa8J3QNX5 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa8J3QNX5 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa8J3QNX5 Gm17435-202ENSMUST00000212699 1998 ntBASIC12.21□□□□□ -0.46
Shisa8J3QNX5 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Shisa8J3QNX5 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa8J3QNX5 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.21□□□□□ -0.46
Shisa8J3QNX5 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Shisa8J3QNX5 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
Shisa8J3QNX5 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Gm5566-201ENSMUST00000116118 459 ntBASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Gm14494-201ENSMUST00000118786 435 ntBASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Gm13365-201ENSMUST00000121188 973 ntBASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Gm18889-201ENSMUST00000174284 929 ntBASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.2□□□□□ -0.46
Shisa8J3QNX5 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Shisa8J3QNX5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Shisa8J3QNX5 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 43.9 ms