Protein–RNA interactions for Protein: J3QMY9

Top6bl, Type 2 DNA topoisomerase 6 subunit B-like, mousemouse

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top6blJ3QMY9 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Gm8810-201ENSMUST00000172895 754 ntBASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Gm18187-201ENSMUST00000196476 984 ntBASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Top6blJ3QMY9 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Gm14371-201ENSMUST00000138925 1518 ntBASIC14□□□□□ -0.17
Top6blJ3QMY9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14□□□□□ -0.17
Top6blJ3QMY9 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14□□□□□ -0.17
Top6blJ3QMY9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14□□□□□ -0.17
Top6blJ3QMY9 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Top6blJ3QMY9 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14□□□□□ -0.17
Top6blJ3QMY9 Gm6161-201ENSMUST00000121942 1102 ntBASIC14□□□□□ -0.17
Top6blJ3QMY9 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Top6blJ3QMY9 Gm6254-201ENSMUST00000168178 1072 ntBASIC14□□□□□ -0.17
Top6blJ3QMY9 Gm6153-201ENSMUST00000172004 1058 ntBASIC14□□□□□ -0.17
Top6blJ3QMY9 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14□□□□□ -0.17
Top6blJ3QMY9 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14□□□□□ -0.17
Top6blJ3QMY9 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14□□□□□ -0.17
Top6blJ3QMY9 Gm5641-202ENSMUST00000198699 1080 ntBASIC14□□□□□ -0.17
Top6blJ3QMY9 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14□□□□□ -0.17
Top6blJ3QMY9 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14□□□□□ -0.17
Top6blJ3QMY9 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC14□□□□□ -0.17
Top6blJ3QMY9 Gm5186-201ENSMUST00000218781 920 ntBASIC14□□□□□ -0.17
Top6blJ3QMY9 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Top6blJ3QMY9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Top6blJ3QMY9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14□□□□□ -0.17
Top6blJ3QMY9 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Gm27847-201ENSMUST00000183711 107 ntBASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Gm27375-201ENSMUST00000183799 107 ntBASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Mir7221-201ENSMUST00000184009 72 ntBASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Gm44069-201ENSMUST00000204898 506 ntBASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Gm6091-201ENSMUST00000098307 165 ntBASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Top6blJ3QMY9 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms