Protein–RNA interactions for Protein: E9PZM7

Scaf11, SR-related CTD-associated factor 11, mousemouse

Known RBP Predictions only

Length 1,456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11E9PZM7 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Mrpl2-202ENSMUST00000113429 998 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Gm44651-201ENSMUST00000207343 372 ntBASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC18.39■□□□□ 0.53
Scaf11E9PZM7 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Acadl-201ENSMUST00000027153 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Gm7600-201ENSMUST00000209657 785 ntBASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Scaf11E9PZM7 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Gm4864-201ENSMUST00000219894 1461 ntBASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Gm13296-201ENSMUST00000117854 997 ntBASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Gm44772-201ENSMUST00000207623 1191 ntBASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Gm18730-201ENSMUST00000218038 343 ntBASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Scaf11E9PZM7 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Spata48-201ENSMUST00000020410 1430 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Gm5904-201ENSMUST00000210286 865 ntBASIC18.36■□□□□ 0.53
Scaf11E9PZM7 AC159819.2-201ENSMUST00000216151 342 ntBASIC18.36■□□□□ 0.53
Scaf11E9PZM7 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 AC154849.4-201ENSMUST00000224868 365 ntBASIC18.36■□□□□ 0.53
Scaf11E9PZM7 AC135469.1-201ENSMUST00000225984 772 ntBASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Lcn6-201ENSMUST00000059693 1254 ntTSL 5 BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Scaf11E9PZM7 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms