Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Gm27306-201ENSMUST00000183970 107 ntBASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Gm33320-201ENSMUST00000192232 530 ntBASIC13.47□□□□□ -0.25
Gm28043E0CXC2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Gm28043E0CXC2 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 AC238940.1-201ENSMUST00000225106 1858 ntBASIC13.46□□□□□ -0.25
Gm28043E0CXC2 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Gm3436-201ENSMUST00000179930 840 ntBASIC13.46□□□□□ -0.25
Gm28043E0CXC2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Gm28043E0CXC2 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gm28043E0CXC2 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gm28043E0CXC2 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Gm28043E0CXC2 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC13.46□□□□□ -0.26
Gm28043E0CXC2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gm28043E0CXC2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gm28043E0CXC2 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
Gm28043E0CXC2 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Gm28043E0CXC2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gm28043E0CXC2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gm28043E0CXC2 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Gm28043E0CXC2 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Gm28043E0CXC2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Gm9063-201ENSMUST00000223299 582 ntBASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Gm28043E0CXC2 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms