Protein–RNA interactions for Protein: B2KF05

Brpf3, Bromodomain and PHD finger-containing, 3, mousemouse

Known RBP Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brpf3B2KF05 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.87□□□□□ -0.03
Brpf3B2KF05 Gm18733-201ENSMUST00000173950 856 ntBASIC14.87□□□□□ -0.03
Brpf3B2KF05 Gm21470-201ENSMUST00000187680 696 ntBASIC14.87□□□□□ -0.03
Brpf3B2KF05 Gm33320-201ENSMUST00000192232 530 ntBASIC14.87□□□□□ -0.03
Brpf3B2KF05 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.87□□□□□ -0.03
Brpf3B2KF05 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.87□□□□□ -0.03
Brpf3B2KF05 Mzt1-203ENSMUST00000227948 952 ntBASIC14.87□□□□□ -0.03
Brpf3B2KF05 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Brpf3B2KF05 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.86□□□□□ -0.03
Brpf3B2KF05 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Gm15460-201ENSMUST00000118147 391 ntBASIC14.86□□□□□ -0.03
Brpf3B2KF05 Gm18889-201ENSMUST00000174284 929 ntBASIC14.86□□□□□ -0.03
Brpf3B2KF05 Mir7221-201ENSMUST00000184009 72 ntBASIC14.86□□□□□ -0.03
Brpf3B2KF05 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Brpf3B2KF05 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Brpf3B2KF05 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Gm13365-201ENSMUST00000121188 973 ntBASIC14.85□□□□□ -0.03
Brpf3B2KF05 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Gm3052-202ENSMUST00000188254 2224 ntBASIC14.85□□□□□ -0.03
Brpf3B2KF05 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Brpf3B2KF05 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Brpf3B2KF05 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms