Protein–RNA interactions for Protein: B1AS29

Grik3, Glutamate receptor ionotropic, kainate 3, mousemouse

Predictions only

Length 919 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Grik3B1AS29 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Grik3B1AS29 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.42□□□□□ -0.1
Grik3B1AS29 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Grik3B1AS29 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Grik3B1AS29 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Grik3B1AS29 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Grik3B1AS29 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.41□□□□□ -0.1
Grik3B1AS29 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.41□□□□□ -0.1
Grik3B1AS29 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Grik3B1AS29 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Grik3B1AS29 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.41□□□□□ -0.1
Grik3B1AS29 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.41□□□□□ -0.1
Grik3B1AS29 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.41□□□□□ -0.1
Grik3B1AS29 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.41□□□□□ -0.1
Grik3B1AS29 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.41□□□□□ -0.1
Grik3B1AS29 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC14.41□□□□□ -0.1
Grik3B1AS29 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Grik3B1AS29 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Grik3B1AS29 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Grik3B1AS29 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Grik3B1AS29 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC14.4□□□□□ -0.1
Grik3B1AS29 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
Grik3B1AS29 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC14.4□□□□□ -0.1
Grik3B1AS29 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.4□□□□□ -0.1
Grik3B1AS29 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC14.4□□□□□ -0.1
Grik3B1AS29 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC14.4□□□□□ -0.1
Grik3B1AS29 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Grik3B1AS29 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.4□□□□□ -0.1
Grik3B1AS29 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Grik3B1AS29 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.4□□□□□ -0.11
Grik3B1AS29 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Grik3B1AS29 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.11
Grik3B1AS29 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Grik3B1AS29 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Grik3B1AS29 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Grik3B1AS29 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Grik3B1AS29 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Grik3B1AS29 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Grik3B1AS29 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Grik3B1AS29 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Grik3B1AS29 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Grik3B1AS29 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Grik3B1AS29 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Grik3B1AS29 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Grik3B1AS29 Gm9728-201ENSMUST00000200197 1055 ntBASIC14.39□□□□□ -0.11
Grik3B1AS29 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC14.39□□□□□ -0.11
Grik3B1AS29 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Grik3B1AS29 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Grik3B1AS29 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms