Protein–RNA interactions for Protein: A2AQ07

Tubb1, Tubulin beta-1 chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb1A2AQ07 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Gm29608-201ENSMUST00000190444 463 ntBASIC13.74□□□□□ -0.21
Tubb1A2AQ07 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Tubb1A2AQ07 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Tubb1A2AQ07 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm11524-201ENSMUST00000119349 807 ntBASIC13.72□□□□□ -0.21
Tubb1A2AQ07 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm28760-201ENSMUST00000185995 736 ntBASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm42612-201ENSMUST00000197986 623 ntBASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm43170-201ENSMUST00000199827 612 ntBASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm20949-201ENSMUST00000206478 952 ntBASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm7730-201ENSMUST00000212486 454 ntBASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Tubb1A2AQ07 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.71□□□□□ -0.21
Tubb1A2AQ07 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Tubb1A2AQ07 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb1A2AQ07 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb1A2AQ07 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Tubb1A2AQ07 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Tubb1A2AQ07 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms