Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Gm15198-201ENSMUST00000117283 177 ntBASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Gm24196-201ENSMUST00000179161 110 ntBASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Cfap99A0A140LIX9 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Gm13050-201ENSMUST00000122149 1345 ntBASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Gm24644-201ENSMUST00000157114 139 ntBASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Gm40466-201ENSMUST00000212174 422 ntBASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Olfr582-201ENSMUST00000098212 960 ntBASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Cfap99A0A140LIX9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cfap99A0A140LIX9 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cfap99A0A140LIX9 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Cfap99A0A140LIX9 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cfap99A0A140LIX9 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Cfap99A0A140LIX9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cfap99A0A140LIX9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Cfap99A0A140LIX9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Gm43818-201ENSMUST00000200605 466 ntBASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Cfap99A0A140LIX9 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Gm14730-201ENSMUST00000122378 1045 ntBASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Gm7498-201ENSMUST00000203282 1084 ntBASIC16■□□□□ 0.15
Cfap99A0A140LIX9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms