Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Asb3-202ENSMUST00000117883 2509 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm5859-201ENSMUST00000165401 2324 ntBASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Gm14140-201ENSMUST00000119999 995 ntBASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav3n-3A0A0G2JEM0 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.15□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.15□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm2651-201ENSMUST00000203560 838 ntBASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Tfcp2-201ENSMUST00000009877 3250 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav3n-3A0A0G2JEM0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms