Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Fbf1-201ENSMUST00000103031 5252 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Trav6n-6A0A075B6B2 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav6n-6A0A075B6B2 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav6n-6A0A075B6B2 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav6n-6A0A075B6B2 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav6n-6A0A075B6B2 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Trav6n-6A0A075B6B2 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav6n-6A0A075B6B2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav6n-6A0A075B6B2 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav6n-6A0A075B6B2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Trav6n-6A0A075B6B2 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Rnf17-202ENSMUST00000223627 2077 ntBASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Mir449b-201ENSMUST00000104833 80 ntBASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Pnpla6-211ENSMUST00000207941 4263 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm10176-201ENSMUST00000159707 2264 ntBASIC10.02□□□□□ -0.81
Trav6n-6A0A075B6B2 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm5385-201ENSMUST00000118988 1559 ntBASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm10327-201ENSMUST00000105222 1002 ntBASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Fgf17-202ENSMUST00000227123 1336 ntBASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Shisa9-202ENSMUST00000170672 3421 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Trav6n-6A0A075B6B2 Gm12020-201ENSMUST00000119030 2042 ntBASIC10□□□□□ -0.81
Trav6n-6A0A075B6B2 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms