Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Trav5-4A0A075B652 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Gm7820-201ENSMUST00000121012 1052 ntBASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Gm13385-201ENSMUST00000121089 220 ntBASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Gm14767-201ENSMUST00000121559 586 ntBASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Gm3436-201ENSMUST00000179930 840 ntBASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Trav5-4A0A075B652 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Gm12585-201ENSMUST00000117307 290 ntBASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Gm37171-201ENSMUST00000192636 1185 ntBASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Trav5-4A0A075B652 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms