Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Gm6376-201ENSMUST00000209407 580 ntBASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Gm7461-201ENSMUST00000058918 827 ntBASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.12□□□□□ -0.79
Trav7n-4A0A075B620 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Gm11873-201ENSMUST00000117877 1304 ntBASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Olfr648-202ENSMUST00000216612 2929 ntAPPRIS P1 TSL 2 BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Mir698-201ENSMUST00000102164 109 ntBASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Gm7153-201ENSMUST00000117092 455 ntBASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Gm18669-201ENSMUST00000216049 778 ntBASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Gm18934-201ENSMUST00000216671 1044 ntBASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 BC001981-202ENSMUST00000191393 1545 ntBASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Ephb6-201ENSMUST00000114732 3762 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.79
Trav7n-4A0A075B620 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC10.1□□□□□ -0.79
Trav7n-4A0A075B620 Hltf-201ENSMUST00000002502 4955 ntAPPRIS P1 TSL 1 (best) BASIC10.1□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 101.3 ms