Protein–RNA interactions for Protein: Q9Z2V6

Hdac5, Histone deacetylase 5, mousemouse

Predictions only

Length 1,113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac5Q9Z2V6 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Gm11637-201ENSMUST00000120601 592 ntBASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hdac5Q9Z2V6 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Gm14350-201ENSMUST00000116642 640 ntBASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Gm10268-201ENSMUST00000085340 555 ntBASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC19.19■□□□□ 0.66
Hdac5Q9Z2V6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Gm38197-201ENSMUST00000192320 2122 ntBASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Snora73a-201ENSMUST00000082453 205 ntBASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hdac5Q9Z2V6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 AC135669.1-202ENSMUST00000216742 540 ntBASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Gm5620-201ENSMUST00000077991 1348 ntBASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Gm38049-201ENSMUST00000195698 1372 ntBASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hdac5Q9Z2V6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac5Q9Z2V6 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac5Q9Z2V6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac5Q9Z2V6 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hdac5Q9Z2V6 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hdac5Q9Z2V6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Hdac5Q9Z2V6 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms