Protein–RNA interactions for Protein: Q9Z2C6

Upk1b, Uroplakin-1b, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk1bQ9Z2C6 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk1bQ9Z2C6 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Upk1bQ9Z2C6 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC12.45□□□□□ -0.42
Upk1bQ9Z2C6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk1bQ9Z2C6 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Upk1bQ9Z2C6 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Upk1bQ9Z2C6 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk1bQ9Z2C6 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Upk1bQ9Z2C6 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk1bQ9Z2C6 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Upk1bQ9Z2C6 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Upk1bQ9Z2C6 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Gm12260-201ENSMUST00000122447 411 ntBASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Gm9824-201ENSMUST00000178707 561 ntBASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Gm33320-201ENSMUST00000192232 530 ntBASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Gm45683-201ENSMUST00000210825 1247 ntBASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Gm16476-201ENSMUST00000221544 139 ntBASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
Upk1bQ9Z2C6 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Gm13385-201ENSMUST00000121089 220 ntBASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Gm21470-201ENSMUST00000187680 696 ntBASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Gm18766-201ENSMUST00000189811 808 ntBASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Upk1bQ9Z2C6 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms