Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Gm5187-201ENSMUST00000117317 991 ntBASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 AC135669.1-202ENSMUST00000216742 540 ntBASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smarcb1Q9Z0H3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Smarcb1Q9Z0H3 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Smarcb1Q9Z0H3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Gm13123-201ENSMUST00000122173 492 ntBASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Gm42693-201ENSMUST00000196779 631 ntBASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.89□□□□□ -0.19
Smarcb1Q9Z0H3 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Gm10146-201ENSMUST00000072739 309 ntBASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Snora73a-201ENSMUST00000082453 205 ntBASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Smarcb1Q9Z0H3 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms