Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Mypopos-202ENSMUST00000205975 2321 ntBASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Sec61a2Q9JLR1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Gm24694-201ENSMUST00000180054 110 ntBASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Gm27663-201ENSMUST00000184839 110 ntBASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Gm7730-201ENSMUST00000212486 454 ntBASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Gm6218-201ENSMUST00000219812 628 ntBASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Gm20445-201ENSMUST00000061905 565 ntBASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Sec61a2Q9JLR1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Syt7-205ENSMUST00000224135 1557 ntBASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Gm42928-201ENSMUST00000197338 3339 ntBASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.1□□□□□ -0.47
Sec61a2Q9JLR1 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms