Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Gm8856-201ENSMUST00000185254 1144 ntBASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Gm38092-201ENSMUST00000195600 653 ntBASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Gm5869-201ENSMUST00000200248 1257 ntBASIC15.02■□□□□ -0
Cacna1fQ9JIS7 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 AC167013.1-201ENSMUST00000228592 202 ntBASIC15.02■□□□□ -0
Cacna1fQ9JIS7 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Cacna1fQ9JIS7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Gm13570-201ENSMUST00000140763 309 ntBASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Gm5904-201ENSMUST00000210286 865 ntBASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cacna1fQ9JIS7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Gm4760-201ENSMUST00000119663 1030 ntBASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC15.01□□□□□ -0.01
Cacna1fQ9JIS7 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Gm12217-201ENSMUST00000118858 696 ntBASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Gm8908-201ENSMUST00000121633 1024 ntBASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Gm8018-201ENSMUST00000173536 789 ntBASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Mir3547-201ENSMUST00000175461 88 ntBASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Gm39404-201ENSMUST00000216350 313 ntBASIC15□□□□□ -0.01
Cacna1fQ9JIS7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Gm8385-201ENSMUST00000058999 643 ntBASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Shroom3-211ENSMUST00000225438 5742 ntBASIC15□□□□□ -0.01
Cacna1fQ9JIS7 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cacna1fQ9JIS7 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms