Protein–RNA interactions for Protein: Q9JIS3

Smco4, Single-pass membrane and coiled-coil domain-containing protein 4, mousemouse

Predictions only

Length 59 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco4Q9JIS3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Smco4Q9JIS3 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Asap1-201ENSMUST00000023008 4580 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
Smco4Q9JIS3 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Cd40-201ENSMUST00000017799 2986 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Vps16-201ENSMUST00000028900 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Gm15165-201ENSMUST00000118140 502 ntBASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Mir3081-201ENSMUST00000175305 84 ntBASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 AC132467.2-202ENSMUST00000227726 559 ntBASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Smco4Q9JIS3 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smco4Q9JIS3 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.7
Smco4Q9JIS3 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.7
Smco4Q9JIS3 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.7
Smco4Q9JIS3 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco4Q9JIS3 Gm40377-201ENSMUST00000204604 2015 ntBASIC10.7□□□□□ -0.7
Smco4Q9JIS3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco4Q9JIS3 Tcf21-202ENSMUST00000218002 1788 ntBASIC10.7□□□□□ -0.7
Smco4Q9JIS3 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco4Q9JIS3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Smco4Q9JIS3 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms