Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Gm44851-201ENSMUST00000205735 2309 ntBASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Gm10275-202ENSMUST00000168697 495 ntBASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Gm42670-201ENSMUST00000201816 1292 ntBASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Gm10275-201ENSMUST00000092620 635 ntBASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Hmg20aQ9DC33 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Kdm4a-202ENSMUST00000097911 4550 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 CT009757.3-201ENSMUST00000223367 2320 ntBASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Hmg20aQ9DC33 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Hmg20aQ9DC33 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms