Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 Gm12151-201ENSMUST00000121374 290 ntBASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 Gm38114-201ENSMUST00000191877 1232 ntBASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Gtf3c6Q9D8P7 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Gtf3c6Q9D8P7 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gtf3c6Q9D8P7 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Gtf3c6Q9D8P7 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Gtf3c6Q9D8P7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Gtf3c6Q9D8P7 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Gtf3c6Q9D8P7 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Casc1-208ENSMUST00000204105 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Gtf3c6Q9D8P7 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 AC124577.2-201ENSMUST00000217413 2420 ntBASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Gm37368-201ENSMUST00000193173 3212 ntBASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Gm15321-201ENSMUST00000121290 288 ntBASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Gtf3c6Q9D8P7 Tmed9-203ENSMUST00000224741 1450 ntBASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 65.9 ms