Protein–RNA interactions for Protein: Q9D541

Ccdc7, Coiled-coil domain-containing protein 7, mousemouse

Predictions only

Length 371 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc7Q9D541 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ccdc7Q9D541 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 AC116503.1-201ENSMUST00000215445 2192 ntBASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Gm24694-201ENSMUST00000180054 110 ntBASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Gm27663-201ENSMUST00000184839 110 ntBASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Gm29608-201ENSMUST00000190444 463 ntBASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Gm20445-201ENSMUST00000061905 565 ntBASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Gm21038-201ENSMUST00000222205 1383 ntBASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ccdc7Q9D541 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Gm37844-201ENSMUST00000192473 4097 ntBASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Gm15321-201ENSMUST00000121290 288 ntBASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Gm14719-201ENSMUST00000121891 340 ntBASIC15.68■□□□□ 0.1
Ccdc7Q9D541 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Mir7684-201ENSMUST00000183858 60 ntBASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Gm9797-201ENSMUST00000052902 613 ntBASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ccdc7Q9D541 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ccdc7Q9D541 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms