Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.77□□□□□ -0.21
Vps28Q9D1C8 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vps28Q9D1C8 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Gm12928-201ENSMUST00000117115 573 ntBASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Gm44397-201ENSMUST00000195950 113 ntBASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vps28Q9D1C8 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Gm5276-201ENSMUST00000196683 1047 ntBASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.75□□□□□ -0.21
Vps28Q9D1C8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vps28Q9D1C8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Gm13730-201ENSMUST00000121036 1462 ntBASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Gm37133-201ENSMUST00000192705 1922 ntBASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vps28Q9D1C8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms