Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Atxn10-201ENSMUST00000163242 2425 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Gm11950-201ENSMUST00000121615 838 ntBASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Gm18489-201ENSMUST00000172565 551 ntBASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Gm5069-202ENSMUST00000192714 1011 ntBASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Pfdn1Q9CWM4 Gm1995-201ENSMUST00000220838 2602 ntBASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 4632427E13Rik-202ENSMUST00000147198 6559 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Gm15794-201ENSMUST00000120182 631 ntBASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Eml5-201ENSMUST00000065716 9482 ntTSL 5 BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Atic-201ENSMUST00000027384 2845 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Pfdn1Q9CWM4 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Gm5763-201ENSMUST00000155951 1530 ntBASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Bod1l-201ENSMUST00000050556 10540 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Gm27646-201ENSMUST00000183989 110 ntBASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Gm8520-201ENSMUST00000186517 868 ntBASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Pfdn1Q9CWM4 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms