Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.39□□□□□ -0.27
Trim33Q99PP7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim33Q99PP7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.38□□□□□ -0.27
Trim33Q99PP7 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim33Q99PP7 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Gm5279-201ENSMUST00000199575 745 ntBASIC13.37□□□□□ -0.27
Trim33Q99PP7 Gm44719-201ENSMUST00000206404 149 ntBASIC13.37□□□□□ -0.27
Trim33Q99PP7 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.37□□□□□ -0.27
Trim33Q99PP7 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Gm38037-201ENSMUST00000192600 1624 ntBASIC13.37□□□□□ -0.27
Trim33Q99PP7 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim33Q99PP7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.36□□□□□ -0.27
Trim33Q99PP7 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Defa-ps4-201ENSMUST00000118021 183 ntBASIC13.36□□□□□ -0.27
Trim33Q99PP7 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Gm26952-201ENSMUST00000181996 409 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Gm27772-201ENSMUST00000184900 187 ntBASIC13.36□□□□□ -0.27
Trim33Q99PP7 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.36□□□□□ -0.27
Trim33Q99PP7 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim33Q99PP7 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 68.6 ms