Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Gm4857-201ENSMUST00000192718 785 ntBASIC16.49■□□□□ 0.23
Trim34aQ99PP6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 AC022775.2-201ENSMUST00000227885 646 ntBASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Gm43423-201ENSMUST00000198390 2094 ntBASIC16.49■□□□□ 0.23
Trim34aQ99PP6 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Gm7809-201ENSMUST00000153199 742 ntBASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Gm4768-201ENSMUST00000206199 686 ntBASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 AC134335.2-201ENSMUST00000227660 440 ntBASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trim34aQ99PP6 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Gm8793-201ENSMUST00000183069 1303 ntBASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Gm15370-201ENSMUST00000117158 253 ntBASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Gm37489-201ENSMUST00000191883 159 ntBASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Gm38158-201ENSMUST00000194617 339 ntBASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Gm8227-201ENSMUST00000223306 571 ntBASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 n-R5s77-201ENSMUST00000083757 119 ntBASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trim34aQ99PP6 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms