Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Gm45743-201ENSMUST00000212701 2795 ntBASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.05□□□□□ -0.32
Rnf111Q99ML9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Rnf111Q99ML9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Gm4875-201ENSMUST00000118257 786 ntBASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Rnf111Q99ML9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Gm12151-201ENSMUST00000121374 290 ntBASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Gm27306-201ENSMUST00000183970 107 ntBASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Rnf111Q99ML9 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf111Q99ML9 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Rnf111Q99ML9 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf111Q99ML9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf111Q99ML9 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf111Q99ML9 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf111Q99ML9 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.02□□□□□ -0.32
Rnf111Q99ML9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf111Q99ML9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf111Q99ML9 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Rnf111Q99ML9 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms