Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Mir698-201ENSMUST00000102164 109 ntBASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Chmp1b1Q99LU0 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Gm13385-201ENSMUST00000121089 220 ntBASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 AC165157.4-201ENSMUST00000220587 139 ntBASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Chmp1b1Q99LU0 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Gm42829-201ENSMUST00000198417 2585 ntBASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Gm10766-202ENSMUST00000194123 606 ntBASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Chmp1b1Q99LU0 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Chmp1b1Q99LU0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 102.8 ms