Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Col20a1Q923P0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col20a1Q923P0 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col20a1Q923P0 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.81■□□□□ 0.12
Col20a1Q923P0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col20a1Q923P0 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col20a1Q923P0 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col20a1Q923P0 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Col20a1Q923P0 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Gm38049-201ENSMUST00000195698 1372 ntBASIC15.8■□□□□ 0.12
Col20a1Q923P0 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.8■□□□□ 0.12
Col20a1Q923P0 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC15.8■□□□□ 0.12
Col20a1Q923P0 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Col20a1Q923P0 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC15.79■□□□□ 0.12
Col20a1Q923P0 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Gm19184-201ENSMUST00000196798 928 ntBASIC15.79■□□□□ 0.12
Col20a1Q923P0 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Snora73a-201ENSMUST00000082453 205 ntBASIC15.79■□□□□ 0.12
Col20a1Q923P0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Col20a1Q923P0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.78■□□□□ 0.12
Col20a1Q923P0 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Mir686-201ENSMUST00000102174 109 ntBASIC15.78■□□□□ 0.12
Col20a1Q923P0 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Gm11637-201ENSMUST00000120601 592 ntBASIC15.78■□□□□ 0.12
Col20a1Q923P0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC15.78■□□□□ 0.12
Col20a1Q923P0 Gm18054-201ENSMUST00000207539 555 ntBASIC15.78■□□□□ 0.12
Col20a1Q923P0 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Col20a1Q923P0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms