Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdha9Q91Y11 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha9Q91Y11 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha9Q91Y11 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha9Q91Y11 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha9Q91Y11 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha9Q91Y11 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha9Q91Y11 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Pcdha9Q91Y11 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
Pcdha9Q91Y11 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Pcdha9Q91Y11 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Gm12490-201ENSMUST00000120255 560 ntBASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Acot6-202ENSMUST00000222921 3622 ntBASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pcdha9Q91Y11 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Gm18473-201ENSMUST00000220543 868 ntBASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pcdha9Q91Y11 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Gm9924-202ENSMUST00000192760 2311 ntBASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Gm43714-201ENSMUST00000198351 1204 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pcdha9Q91Y11 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 60.1 ms