Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Gm21854-201ENSMUST00000179901 471 ntBASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 AC139580.1-202ENSMUST00000223574 928 ntBASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhb8Q91XZ2 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
Pcdhb8Q91XZ2 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Gm14719-201ENSMUST00000121891 340 ntBASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb8Q91XZ2 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Gm24694-201ENSMUST00000180054 110 ntBASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Gm27663-201ENSMUST00000184839 110 ntBASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Mir7023-201ENSMUST00000185093 64 ntBASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.13□□□□□ -0.31
Pcdhb8Q91XZ2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms