Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims2Q91XD2 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Lims2Q91XD2 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims2Q91XD2 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims2Q91XD2 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims2Q91XD2 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.66□□□□□ -0.22
Lims2Q91XD2 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims2Q91XD2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Lims2Q91XD2 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Gm15459-201ENSMUST00000117405 1941 ntBASIC13.65□□□□□ -0.22
Lims2Q91XD2 Gm8355-201ENSMUST00000177767 1941 ntBASIC13.65□□□□□ -0.22
Lims2Q91XD2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Gm23931-201ENSMUST00000103842 109 ntBASIC13.65□□□□□ -0.22
Lims2Q91XD2 Gm14127-201ENSMUST00000117906 678 ntBASIC13.65□□□□□ -0.22
Lims2Q91XD2 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.65□□□□□ -0.22
Lims2Q91XD2 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Lims2Q91XD2 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.64□□□□□ -0.23
Lims2Q91XD2 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Gm10339-203ENSMUST00000225409 1671 ntBASIC13.64□□□□□ -0.23
Lims2Q91XD2 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC13.64□□□□□ -0.23
Lims2Q91XD2 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Snora78-201ENSMUST00000158630 128 ntBASIC13.64□□□□□ -0.23
Lims2Q91XD2 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 AY702102-202ENSMUST00000194651 1173 ntBASIC13.64□□□□□ -0.23
Lims2Q91XD2 Gm19931-201ENSMUST00000198920 368 ntBASIC13.64□□□□□ -0.23
Lims2Q91XD2 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.64□□□□□ -0.23
Lims2Q91XD2 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Lims2Q91XD2 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims2Q91XD2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Lims2Q91XD2 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Lims2Q91XD2 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims2Q91XD2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Lims2Q91XD2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims2Q91XD2 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims2Q91XD2 AC131068.2-201ENSMUST00000226175 1453 ntBASIC13.63□□□□□ -0.23
Lims2Q91XD2 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims2Q91XD2 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims2Q91XD2 Gm1335-201ENSMUST00000121653 386 ntBASIC13.63□□□□□ -0.23
Lims2Q91XD2 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.63□□□□□ -0.23
Lims2Q91XD2 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Lims2Q91XD2 Gm40466-201ENSMUST00000212174 422 ntBASIC13.63□□□□□ -0.23
Lims2Q91XD2 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC13.63□□□□□ -0.23
Lims2Q91XD2 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.63□□□□□ -0.23
Lims2Q91XD2 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims2Q91XD2 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Lims2Q91XD2 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms