Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Gm13369-201ENSMUST00000119442 987 ntBASIC14.29□□□□□ -0.12
TraipQ8VIG6 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC14.29□□□□□ -0.12
TraipQ8VIG6 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Lsm3-205ENSMUST00000206947 618 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Gm45331-201ENSMUST00000209868 554 ntBASIC14.29□□□□□ -0.12
TraipQ8VIG6 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.29□□□□□ -0.12
TraipQ8VIG6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
TraipQ8VIG6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.28□□□□□ -0.12
TraipQ8VIG6 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC14.28□□□□□ -0.12
TraipQ8VIG6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Gm7029-201ENSMUST00000173226 450 ntBASIC14.28□□□□□ -0.12
TraipQ8VIG6 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.28□□□□□ -0.12
TraipQ8VIG6 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.28□□□□□ -0.12
TraipQ8VIG6 Gm18054-201ENSMUST00000207539 555 ntBASIC14.28□□□□□ -0.12
TraipQ8VIG6 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TraipQ8VIG6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TraipQ8VIG6 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Gm8801-201ENSMUST00000173255 1064 ntBASIC14.27□□□□□ -0.13
TraipQ8VIG6 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.27□□□□□ -0.13
TraipQ8VIG6 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Gm10146-201ENSMUST00000072739 309 ntBASIC14.27□□□□□ -0.13
TraipQ8VIG6 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TraipQ8VIG6 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TraipQ8VIG6 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms