Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim60Q8VI40 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.91□□□□□ -0.18
Trim60Q8VI40 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC13.91□□□□□ -0.18
Trim60Q8VI40 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Gm27680-201ENSMUST00000184192 160 ntBASIC13.91□□□□□ -0.18
Trim60Q8VI40 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC13.91□□□□□ -0.18
Trim60Q8VI40 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.91□□□□□ -0.18
Trim60Q8VI40 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim60Q8VI40 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.9□□□□□ -0.18
Trim60Q8VI40 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Taok2-202ENSMUST00000117394 4985 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.9□□□□□ -0.18
Trim60Q8VI40 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trim60Q8VI40 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim60Q8VI40 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.9□□□□□ -0.19
Trim60Q8VI40 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.9□□□□□ -0.19
Trim60Q8VI40 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Gm27321-201ENSMUST00000185021 205 ntBASIC13.89□□□□□ -0.19
Trim60Q8VI40 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim60Q8VI40 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms