Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 AC160338.1-201ENSMUST00000214232 705 ntBASIC13.08□□□□□ -0.32
Q8VDP2 AC127349.1-201ENSMUST00000224590 266 ntBASIC13.08□□□□□ -0.32
Q8VDP2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
Q8VDP2 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Q8VDP2 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.08□□□□□ -0.32
Q8VDP2 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.08□□□□□ -0.32
Q8VDP2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 AC241621.2-201ENSMUST00000223991 2151 ntBASIC13.08□□□□□ -0.32
Q8VDP2 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Q8VDP2 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Q8VDP2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.08□□□□□ -0.32
Q8VDP2 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Q8VDP2 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Q8VDP2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.08□□□□□ -0.32
Q8VDP2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Q8VDP2 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Acad9-201ENSMUST00000011492 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.07□□□□□ -0.32
Q8VDP2 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC13.07□□□□□ -0.32
Q8VDP2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC13.07□□□□□ -0.32
Q8VDP2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.07□□□□□ -0.32
Q8VDP2 Gm2651-201ENSMUST00000203560 838 ntBASIC13.07□□□□□ -0.32
Q8VDP2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC13.07□□□□□ -0.32
Q8VDP2 CT009713.7-201ENSMUST00000224689 571 ntBASIC13.07□□□□□ -0.32
Q8VDP2 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
Q8VDP2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Q8VDP2 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Q8VDP2 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Q8VDP2 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC13.06□□□□□ -0.32
Q8VDP2 Smim1-208ENSMUST00000143047 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Ppp6r3-202ENSMUST00000113997 4952 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
Q8VDP2 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Trmt61b-202ENSMUST00000137830 2572 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Gm43727-201ENSMUST00000198021 2647 ntBASIC13.06□□□□□ -0.32
Q8VDP2 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC13.06□□□□□ -0.32
Q8VDP2 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Q8VDP2 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Q8VDP2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC13.06□□□□□ -0.32
Q8VDP2 Gm7862-201ENSMUST00000121461 292 ntBASIC13.06□□□□□ -0.32
Q8VDP2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Q8VDP2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.06□□□□□ -0.32
Q8VDP2 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Q8VDP2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Q8VDP2 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Q8VDP2 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Q8VDP2 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.06□□□□□ -0.32
Q8VDP2 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Q8VDP2 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Q8VDP2 Gm37324-201ENSMUST00000194500 4504 ntBASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms