Protein–RNA interactions for Protein: Q8K377

Lrrtm1, Leucine-rich repeat transmembrane neuronal protein 1, mousemouse

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrtm1Q8K377 Gm6539-201ENSMUST00000119157 1064 ntBASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Gm8116-201ENSMUST00000182917 1201 ntBASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Gm43073-201ENSMUST00000198200 1189 ntBASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Gm45667-201ENSMUST00000210380 1316 ntBASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Lrrtm1Q8K377 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Gm16010-202ENSMUST00000145410 4427 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Gm13015-201ENSMUST00000118674 204 ntBASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Rprl2-201ENSMUST00000157150 290 ntBASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Gm6443-201ENSMUST00000203599 874 ntBASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Gm45683-201ENSMUST00000210825 1247 ntBASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Matn2-203ENSMUST00000226766 3252 ntBASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Gm43463-201ENSMUST00000195967 1803 ntBASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Lrrtm1Q8K377 Gm18263-201ENSMUST00000220846 1928 ntBASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Gm44719-201ENSMUST00000206404 149 ntBASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC11.5□□□□□ -0.57
Lrrtm1Q8K377 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms