Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Cchcr1Q8K2I2 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cchcr1Q8K2I2 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cchcr1Q8K2I2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cchcr1Q8K2I2 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Cchcr1Q8K2I2 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Gm38037-201ENSMUST00000192600 1624 ntBASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 AC159114.1-201ENSMUST00000220349 266 ntBASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 AC165157.4-201ENSMUST00000220587 139 ntBASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Syt7-205ENSMUST00000224135 1557 ntBASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Ankra2-208ENSMUST00000226100 1476 ntBASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC15.9■□□□□ 0.14
Cchcr1Q8K2I2 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.14
Cchcr1Q8K2I2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Gm24447-201ENSMUST00000083977 338 ntBASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Cchcr1Q8K2I2 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Cchcr1Q8K2I2 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms