Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Gm15222-202ENSMUST00000228667 1726 ntBASIC13.73□□□□□ -0.21
CopaQ8CIE6 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.73□□□□□ -0.21
CopaQ8CIE6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Gm15240-201ENSMUST00000118156 720 ntBASIC13.73□□□□□ -0.21
CopaQ8CIE6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.73□□□□□ -0.21
CopaQ8CIE6 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.73□□□□□ -0.21
CopaQ8CIE6 Gm18027-201ENSMUST00000218947 619 ntBASIC13.73□□□□□ -0.21
CopaQ8CIE6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
CopaQ8CIE6 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.73□□□□□ -0.21
CopaQ8CIE6 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Gm8602-201ENSMUST00000184045 607 ntBASIC13.72□□□□□ -0.21
CopaQ8CIE6 Gm27701-201ENSMUST00000184498 110 ntBASIC13.72□□□□□ -0.21
CopaQ8CIE6 Mir7654-201ENSMUST00000185082 70 ntBASIC13.72□□□□□ -0.21
CopaQ8CIE6 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.72□□□□□ -0.21
CopaQ8CIE6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CopaQ8CIE6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.71□□□□□ -0.21
CopaQ8CIE6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Gm15806-201ENSMUST00000120696 955 ntBASIC13.71□□□□□ -0.21
CopaQ8CIE6 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Gm37748-201ENSMUST00000194379 1140 ntBASIC13.71□□□□□ -0.21
CopaQ8CIE6 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.71□□□□□ -0.21
CopaQ8CIE6 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms