Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab11fip3Q8CHD8 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Gm19309-201ENSMUST00000218295 205 ntBASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab11fip3Q8CHD8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Gm8801-201ENSMUST00000173255 1064 ntBASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Gm19184-201ENSMUST00000196798 928 ntBASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Gm6007-201ENSMUST00000208170 823 ntBASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC17.3■□□□□ 0.36
Rab11fip3Q8CHD8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Gm8805-201ENSMUST00000117848 313 ntBASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Gm7029-201ENSMUST00000173226 450 ntBASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Gm45331-201ENSMUST00000209868 554 ntBASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Gm6013-201ENSMUST00000212264 699 ntBASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 AC154276.1-201ENSMUST00000228874 1299 ntBASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Rab11fip3Q8CHD8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms